Department of Microbiology, Immunology, and Biochemistry

Research Output 1970 2019

2019

Angiotensin-converting enzyme insertion/deletion (rs106180) and angiotensin type 1 receptor A1166C (rs106165) genotypes and psoriasis: Correlation with cellular immunity, lipid profile, and oxidative stress markers

Tanhapour, M., Falahi, B., Vaisi-Raygani, A., Bahrehmand, F., Kiani, A., Rahimi, Z., Vaisi-Raygani, A. A., Shakiba, E. & Pourmotabbed, T., Feb 1 2019, In : Journal of Cellular Biochemistry. 120, 2, p. 2627-2633 7 p.

Research output: Contribution to journalArticle

Angiotensin Type 1 Receptor
Oxidative stress
Peptidyl-Dipeptidase A
Psoriasis
Cellular Immunity

Apoptosis signal-regulating kinase-1 promotes inflammasome priming in macrophages

Immanuel, C. N., Teng, B., Dong, B., Gordon, E. M., Kennedy, J. A., Luellen, C., Schwingshackl, A., Cormier, S. A., Fitzpatrick, E. & Waters, C. M., Mar 1 2019, In : American Journal of Physiology - Lung Cellular and Molecular Physiology. 316, 3, p. L418-L427

Research output: Contribution to journalArticle

MAP Kinase Kinase Kinase 5
Inflammasomes
Phosphotransferases
Macrophages
Lipopolysaccharides
1 Citation (Scopus)

Association between activity and genotypes of paraoxonase1 L 55 M (rs854560) increases the disease activity of rheumatoid arthritis through oxidative stress

Tanhapour, M., Shahmohamadnejad, S., Vaisi-Raygani, A., Kiani, A., Shakiba, Y., Rahimi, Z., Bahrehmand, F., Shakiba, E., Vaisi-Raygani, A. A., Alibakhshi, R., Eivazi, A. & Pourmotabbed, T., Feb 1 2019, In : Molecular Biology Reports. 46, 1, p. 741-749 9 p.

Research output: Contribution to journalArticle

Rheumatoid Arthritis
Oxidative Stress
Genotype
Neopterin
C-Reactive Protein

Association between the −11377 C/G and −11391 G/A polymorphisms of adiponectin gene and adiponectin levels with susceptibility to type 1 and type 2 diabetes mellitus in population from the west of Iran, correlation with lipid profile

Nomani, H., Hesami, O., Vaisi-Raygani, A., Tanhapour, M., Bahrehmand, F., Rahimi, Z., Kiani, A., Shakiba, E. & Pourmotabbed, T., Mar 1 2019, In : Journal of Cellular Biochemistry. 120, 3, p. 3574-3582 9 p.

Research output: Contribution to journalArticle

Adiponectin
Medical problems
Iran
Polymorphism
Type 1 Diabetes Mellitus

Comprehensive comparative analysis of cholesterol catabolic genes/proteins in mycobacterial species

van Wyk, R., van Wyk, M., Mashele, S. S., Nelson, D. & Syed, K., Mar 1 2019, In : International journal of molecular sciences. 20, 5, 1032.

Research output: Contribution to journalArticle

Open Access
Cholesterol
cholesterol
genes
Genes
proteins

Cytochrome P450s in the sugarcane Saccharum spontaneum

Nelson, D., Jan 1 2019, In : Tropical Plant Biology.

Research output: Contribution to journalArticle

Saccharum spontaneum
Saccharum
Cytochromes
cytochromes
sugarcane

Diversity and evolution of cytochromes P450 in stramenopiles

Teng, L., Fan, X., Nelson, D., Han, W., Zhang, X., Xu, D., Renault, H., Markov, G. V. & Ye, N., Mar 8 2019, In : Planta. 249, 3, p. 647-661 15 p.

Research output: Contribution to journalArticle

Stramenopiles
Diatoms
Bacillariophyceae
Phaeophyta
cytochrome P-450

Editorial: Autophagy in autoimmunity

Zhou, X. J., Verginis, P., Martinez, J. & Radic, M., Jan 1 2019, In : Frontiers in immunology. 10, FEB, 301.

Research output: Contribution to journalEditorial

Open Access
Autophagy
Autoimmunity
Immunity

Efficacy of a ML336 derivative against Venezuelan and eastern equine encephalitis viruses

Jonsson, C., Cao, X., Lee, J., Gabbard, J. D., Chu, Y. K., Fitzpatrick, E., Julander, J., Chung, D. H., Stabenow, J. & Golden, J. E., Jul 1 2019, In : Antiviral Research. 167, p. 25-34 10 p.

Research output: Contribution to journalArticle

Open Access
Eastern equine encephalitis virus
Venezuelan Equine Encephalitis Viruses
Trinidad and Tobago
Equidae
Alphavirus

Feature learning using stacked autoencoder for shared and multimodal fusion of medical images

Singh, V., Verma, N. K., Ul Islam, Z. & Cui, Y., Jan 1 2019, Advances in Intelligent Systems and Computing. Springer Verlag, p. 53-66 14 p. (Advances in Intelligent Systems and Computing; vol. 798).

Research output: Chapter in Book/Report/Conference proceedingChapter

Fusion reactions
Image analysis
Learning systems
Deep learning

Functional Analysis of Genetic Variants and Somatic Mutations Impacting MicroRNA-Target Recognition: Bioinformatics Resources

Ziebarth, J. D., Bhattacharya, A. & Cui, Y., Jan 1 2019, Methods in Molecular Biology. Humana Press Inc., p. 101-120 20 p. (Methods in Molecular Biology; vol. 1970).

Research output: Chapter in Book/Report/Conference proceedingChapter

Computational Biology
MicroRNAs
Mutation
Untranslated RNA
Genetic Databases
1 Citation (Scopus)

Genomic insights into neonicotinoid sensitivity in the solitary bee Osmia bicornis

Beadle, K., Singh, K. S., Troczka, B. J., Randall, E., Zaworra, M., Zimmer, C. T., Hayward, A., Reid, R., Kor, L., Kohler, M., Buer, B., Nelson, D., Williamson, M. S., Davies, T. G. E., Field, L. M., Nauen, R. & Bass, C., Feb 1 2019, In : PLoS genetics. 15, 2, e1007903.

Research output: Contribution to journalArticle

Open Access
Osmia rufa
solitary bees
neonicotinoid insecticides
Bees
bee

Manuka Honey Modulates the Inflammatory Behavior of a dHL-60 Neutrophil Model under the Cytotoxic Limit

Minden-Birkenmaier, B. A., Cherukuri, K., Smith, R., Radic, M. & Bowlin, G. L., Jan 1 2019, In : International Journal of Biomaterials. 2019, 6132581.

Research output: Contribution to journalArticle

Open Access
Phosphorylation
Superoxides
Cytotoxicity
Assays
Chemical activation

Multifaceted Roles of Neutrophils in Autoimmune Diseases

Zhao, Y., Marion, T. & Wang, Q., Jan 1 2019, In : Journal of immunology research. 2019, 1 p.

Research output: Contribution to journalEditorial

Open Access
Autoimmune Diseases
Neutrophils

Nanomaterial exposure induced neutrophil extracellular traps: A new target in inflammation and innate immunity

Yang, H., Marion, T., Liu, Y., Zhang, L., Cao, X., Hu, H., Zhao, Y. & Herrmann, M., Jan 1 2019, In : Journal of Immunology Research. 2019, 3560180.

Research output: Contribution to journalReview article

Open Access
Nanostructures
Innate Immunity
Nanoparticles
Inflammation
Nanotechnology

Rapid sequencing of multiple RNA viruses in their native form

Wongsurawat, T., Jenjaroenpun, P., Taylor, M. K., Lee, J., Tolardo, A. L., Parvathareddy, J., Kandel, S., Wadley, T. D., Kaewnapan, B., Athipanyasilp, N., Skidmore, A., Chung, D., Chaimayo, C., Whitt, M., Kantakamalakul, W., Sutthent, R., Horthongkham, N., Ussery, D. W., Jonsson, C. & Nookaew, I., Jan 1 2019, In : Frontiers in Microbiology. 10, FEB, 260.

Research output: Contribution to journalArticle

Open Access
RNA Viruses
Genome
Viruses
Messenger RNA
Nanopores

Similarities, variations, and evolution of cytochrome P450s in Streptomyces versus Mycobacterium

Senate, L. M., Tjatji, M. P., Pillay, K., Chen, W., Zondo, N. M., Syed, P. R., Mnguni, F. C., Chiliza, Z. E., Bamal, H. D., Karpoormath, R., Khoza, T., Mashele, S. S., Blackburn, J. M., Yu, J. H., Nelson, D. & Syed, K., Dec 1 2019, In : Scientific Reports. 9, 1, 3962.

Research output: Contribution to journalArticle

Open Access
Streptomyces
Mycobacterium
Mixed Function Oxygenases
Cytochrome P-450 Enzyme System
Secondary Metabolism
2 Citations (Scopus)

Sustained B cell depletion by CD19-targeted CAR T cells is a highly effective treatment for murine lupus

Kansal, R., Richardson, N., Neeli, I., Khawaja, S., Chamberlain, D., Ghani, M., Ghani, Q. U. A., Balazs, L., Beranova, S., Giorgianni, F., Kochenderfer, J. N., Marion, T., Albritton, L. & Radic, M., Jan 1 2019, In : Science Translational Medicine. 11, 482, eaav1648.

Research output: Contribution to journalArticle

Open Access
T-Cell Antigen Receptor
B-Lymphocytes
Clinical Trials
Therapeutics
Antigen Receptors
3 Citations (Scopus)

To NET or not to NET:current opinions and state of the science regarding the formation of neutrophil extracellular traps

Boeltz, S., Amini, P., Anders, H. J., Andrade, F., Bilyy, R., Chatfield, S., Cichon, I., Clancy, D. M., Desai, J., Dumych, T., Dwivedi, N., Gordon, R. A., Hahn, J., Hidalgo, A., Hoffmann, M. H., Kaplan, M. J., Knight, J. S., Kolaczkowska, E., Kubes, P., Leppkes, M. & 29 othersManfredi, A. A., Martin, S. J., Maueröder, C., Maugeri, N., Mitroulis, I., Munoz, L. E., Nakazawa, D., Neeli, I., Nizet, V., Pieterse, E., Radic, M., Reinwald, C., Ritis, K., Rovere-Querini, P., Santocki, M., Schauer, C., Schett, G., Shlomchik, M. J., Simon, H. U., Skendros, P., Stojkov, D., Vandenabeele, P., Berghe, T. V., van der Vlag, J., Vitkov, L., von Köckritz-Blickwede, M., Yousefi, S., Zarbock, A. & Herrmann, M., Mar 1 2019, In : Cell Death and Differentiation. 26, 3, p. 395-408 14 p.

Research output: Contribution to journalReview article

Dissent and Disputes
Research
Extracellular Traps
Cell Death
Anti-Inflammatory Agents
2018
8 Citations (Scopus)

Advances in Serodiagnostic Testing for Lyme Disease Are at Hand

Branda, J. A., Body, B. A., Boyle, J., Branson, B. M., Dattwyler, R. J., Fikrig, E., Gerald, N. J., Gomes-Solecki, M., Kintrup, M., Ledizet, M., Levin, A. E., Lewinski, M., Liotta, L. A., Marques, A., Mead, P. S., Mongodin, E. F., Pillai, S., Rao, P., Robinson, W. H., Roth, K. M. & 7 othersSchriefer, M. E., Slezak, T., Snyder, J., Steere, A. C., Witkowski, J., Wong, S. J. & Schutzer, S. E., Mar 19 2018, In : Clinical Infectious Diseases. 66, 7, p. 1133-1139 7 p.

Research output: Contribution to journalReview article

Borrelia burgdorferi
Lyme Disease
Hand
Western Blotting
Antigens
10 Citations (Scopus)

Allele-defined genome of the autopolyploid sugarcane Saccharum spontaneum L.

Zhang, J., Zhang, X., Tang, H., Zhang, Q., Hua, X., Ma, X., Zhu, F., Jones, T., Zhu, X., Bowers, J., Wai, C. M., Zheng, C., Shi, Y., Chen, S., Xu, X., Yue, J., Nelson, D., Huang, L., Li, Z., Xu, H. & 88 othersZhou, D., Wang, Y., Hu, W., Lin, J., Deng, Y., Pandey, N., Mancini, M., Zerpa, D., Nguyen, J. K., Wang, L., Yu, L., Xin, Y., Ge, L., Arro, J., Han, J. O., Chakrabarty, S., Pushko, M., Zhang, W., Ma, Y., Ma, P., Lv, M., Chen, F., Zheng, G., Xu, J., Yang, Z., Deng, F., Chen, X., Liao, Z., Zhang, X., Lin, Z., Lin, H., Yan, H., Kuang, Z., Zhong, W., Liang, P., Wang, G., Yuan, Y., Shi, J., Hou, J., Lin, J., Jin, J., Cao, P., Shen, Q., Jiang, Q., Zhou, P., Ma, Y., Zhang, X., Xu, R., Liu, J., Zhou, Y., Jia, H., Ma, Q., Qi, R., Zhang, Z., Fang, J., Fang, H., Song, J., Wang, M., Dong, G., Wang, G., Chen, Z., Ma, T., Liu, H., Dhungana, S. R., Huss, S. E., Yang, X., Sharma, A., Trujillo, J. H., Martinez, M. C., Hudson, M., Riascos, J. J., Schuler, M., Chen, L. Q., Braun, D. M., Li, L., Yu, Q., Wang, J., Wang, K., Schatz, M. C., Heckerman, D., Van Sluys, M. A., Souza, G. M., Moore, P. H., Sankoff, D., VanBuren, R., Paterson, A. H., Nagai, C. & Ming, R., Nov 1 2018, In : Nature Genetics. 50, 11, p. 1565-1573 9 p.

Research output: Contribution to journalArticle

Saccharum
Alleles
Genome
Chromosomes, Human, Pair 4
Disease Resistance

An antimycobacterial pleuromutilin analogue effective against dormant bacilli

Lemieux, M. R., Siricilla, S., Mitachi, K., Eslamimehr, S., Wang, Y., Yang, D., Pressly, J. D., Kong, Y., Park, F., Franzblau, S. G. & Kurosu, M., Sep 15 2018, In : Bioorganic and Medicinal Chemistry. 26, 17, p. 4787-4796 10 p.

Research output: Contribution to journalArticle

Bacilli
Bacillus
Mycobacterium tuberculosis
Pharmacokinetics
Gram-Positive Bacteria

Annotation, classification, genomic organization and expression of the Vitis vinifera CYPome

Ilc, T., Arista, G., Tavares, R., Navrot, N., Duchêne, E., Velt, A., Choulet, F., Paux, E., Fischer, M., Nelson, D., Hugueney, P., Werck-Reichhart, D. & Rustenholz, C., Jun 1 2018, In : PloS one. 13, 6, e0199902.

Research output: Contribution to journalArticle

Vitis
Vitis vinifera
Genes
Cytochrome P-450 Enzyme System
taxonomy
3 Citations (Scopus)

A recurrent de novo missense mutation in UBTF causes developmental neuroregression

C4RCD Research Group, Feb 15 2018, In : Human molecular genetics. 27, 4, p. 691-705 15 p., ddx435.

Research output: Contribution to journalArticle

Missense Mutation
Transcription Factors
DNA-Directed RNA Polymerases
Exome
Dysarthria
2 Citations (Scopus)

Blooming of unusual cytochrome P450s by tandem duplication in the pathogenic fungus conidiobolus coronatus

Ngwenya, M. L., Chen, W., Basson, A. K., Shandu, J. S., Yu, J. H., Nelson, D. & Syed, K., Jun 9 2018, In : International journal of molecular sciences. 19, 6, 1711.

Research output: Contribution to journalArticle

Conidiobolus
fungi
cytochromes
azoles
Cytochromes

Burning controversies in NETs and autoimmunity: The mysteries of cell death and autoimmune disease

Dwivedi, N. & Radic, M., Aug 18 2018, In : Autoimmunity. 51, 6, p. 267-280 14 p.

Research output: Contribution to journalReview article

Autoimmunity
Autoimmune Diseases
Cell Death
Neutrophils
Aptitude
2 Citations (Scopus)

Cellular and molecular mechanisms of anti-phospholipid syndrome

Radic, M. & Pattanaik, D., May 7 2018, In : Frontiers in immunology. 9, MAY, 969.

Research output: Contribution to journalReview article

Antiphospholipid Syndrome
Phospholipids
Glycoproteins
Antigen-Antibody Complex
Venous Thrombosis

Comparative analyses and structural insights of the novel cytochrome P450 fusion protein family CYP5619 in Oomycetes

Bamal, H. D., Chen, W., Mashele, S. S., Nelson, D., Kappo, A. P., Mosa, R. A., Yu, J. H., Tuszynski, J. A. & Syed, K., Dec 1 2018, In : Scientific Reports. 8, 1, 6597.

Research output: Contribution to journalArticle

malachite green
Oomycetes
cytochrome P-450
amino acids
peroxidase
2 Citations (Scopus)

Comparative analyses of cytochrome p450s and those associated with secondary metabolism in Bacillus species

Mthethwa, B. C., Chen, W., Ngwenya, M. L., Kappo, A. P., Syed, P. R., Karpoormath, R., Yu, J. H., Nelson, D. & Syed, K., Nov 16 2018, In : International journal of molecular sciences. 19, 11, 3623.

Research output: Contribution to journalArticle

Secondary Metabolism
Bacillus
metabolites
cytochromes
metabolism
1 Citation (Scopus)

Complete genome sequence of an ON1 human respiratory syncytial virus strain isolated in Lebanon in 2015

Ezzeddine, A., Soudani, N., Lee, C. K., Dbaibo, G., Elbahesh, H. & Zaraketa, H., Apr 1 2018, In : Genome Announcements. 6, 16, e00316-18.

Research output: Contribution to journalArticle

Human respiratory syncytial virus
Lebanon
Genome
Hospital Emergency Service
Genotype
1 Citation (Scopus)

Computational analysis of envelope glycoproteins from diverse geographical isolates of bovine leukemia virus identifies highly conserved peptide motifs

Pluta, A., Albritton, L., Rola-Łuszczak, M. & Kuźmak, J., Jan 8 2018, In : Retrovirology. 15, 1, 2.

Research output: Contribution to journalArticle

Bovine Leukemia Virus
T-Lymphocyte Epitopes
Glycoproteins
Amino Acids
Peptides
2 Citations (Scopus)
Medical Genetics
Missense Mutation
Names
Molecular Biology
corrigendum

Cytochrome P450 (CYP450,2D6*A), N-acetyltransferase-2 (NAT2*7, A) and multidrug resistance 1 (MDR1 3435 T) alleles collectively increase risk of ulcerative colitis

Lotfi, F., Bahrehmand, F., Vaisi-Raygani, A., Khodarahmi, R., Tanhapour, M., Kiani, A., Rahimi, Z. & Pourmotabbed, T., Nov 1 2018, In : Archives of Iranian medicine. 21, 11, p. 530-535 6 p.

Research output: Contribution to journalArticle

Cytochrome P-450 CYP2D6
Acetyltransferases
Multiple Drug Resistance
Ulcerative Colitis
Alleles
20 Citations (Scopus)

Cytochrome P450 diversity in the tree of life

Nelson, D., Jan 1 2018, In : Biochimica et Biophysica Acta - Proteins and Proteomics. 1866, 1, p. 141-154 14 p.

Research output: Contribution to journalArticle

Cytochrome P-450 Enzyme System
Horseshoe Crabs
Fresh Water
Fungi
Anthocerotophyta

Cytoprotective role of vitamin E in porcine adipose-tissue-derived mesenchymal stem cells against hydrogen-peroxide-induced oxidative stress

Bhatti, F. U. R., Kim, S. J., Yi, A-K., Hasty, K. & Cho, H., Oct 1 2018, In : Cell and Tissue Research. 374, 1, p. 111-120 10 p.

Research output: Contribution to journalArticle

Mesenchymal Stromal Cells
Vitamin E
Hydrogen Peroxide
Adipose Tissue
Oxidative Stress
2 Citations (Scopus)

Deletion of DGCR8 in VSMCs of adult mice results in loss of vascular reactivity, reduced blood pressure and neointima formation

Zou, Y., Chen, Z., Jennings, B. L., Zhao, G., Gu, Q., Bhattacharya, A., Cui, Y., Yu, B., Malik, K. & Yue, J., Dec 1 2018, In : Scientific Reports. 8, 1, 19660.

Research output: Contribution to journalArticle

DiGeorge Syndrome
Neointima
Vascular Smooth Muscle
Smooth Muscle Myocytes
Blood Vessels
1 Citation (Scopus)

Diagnosis of Human Leptospirosis in a Clinical Setting: Real-Time PCR High Resolution Melting Analysis for Detection of Leptospira at the Onset of Disease

Esteves, L. M., Bulhões, S. M., Branco, C. C., Carreira, T., Vieira, M. L., Gomes-Solecki, M. & Mota-Vieira, L., Dec 1 2018, In : Scientific Reports. 8, 1, 9213.

Research output: Contribution to journalArticle

Leptospira
Leptospirosis
Freezing
Real-Time Polymerase Chain Reaction
Azores

Erratum to: Allele-defined genome of the autopolyploid sugarcane Saccharum spontaneum L. (Nature Genetics, (2018), 50, 11, (1565-1573), 10.1038/s41588-018-0237-2)

Zhang, J., Zhang, X., Tang, H., Zhang, Q., Hua, X., Ma, X., Zhu, F., Jones, T., Zhu, X., Bowers, J., Wai, C. M., Zheng, C., Shi, Y., Chen, S., Xu, X., Yue, J., Nelson, D., Huang, L., Li, Z., Xu, H. & 88 othersZhou, D., Wang, Y., Hu, W., Lin, J., Deng, Y., Pandey, N., Mancini, M., Zerpa, D., Nguyen, J. K., Wang, L., Yu, L., Xin, Y., Ge, L., Arro, J., Han, J. O., Chakrabarty, S., Pushko, M., Zhang, W., Ma, Y., Ma, P., Lv, M., Chen, F., Zheng, G., Xu, J., Yang, Z., Deng, F., Chen, X., Liao, Z., Zhang, X., Lin, Z., Lin, H., Yan, H., Kuang, Z., Zhong, W., Liang, P., Wang, G., Yuan, Y., Shi, J., Hou, J., Lin, J., Jin, J., Cao, P., Shen, Q., Jiang, Q., Zhou, P., Ma, Y., Zhang, X., Xu, R., Liu, J., Zhou, Y., Jia, H., Ma, Q., Qi, R., Zhang, Z., Fang, J., Fang, H., Song, J., Wang, M., Dong, G., Wang, G., Chen, Z., Ma, T., Liu, H., Dhungana, S. R., Huss, S. E., Yang, X., Sharma, A., Trujillo, J. H., Martinez, M. C., Hudson, M., Riascos, J. J., Schuler, M., Chen, L. Q., Braun, D. M., Li, L., Yu, Q., Wang, J., Wang, K., Schatz, M. C., Heckerman, D., Van Sluys, M. A., Souza, G. M., Moore, P. H., Sankoff, D., VanBuren, R., Paterson, A. H., Nagai, C. & Ming, R., Dec 1 2018, In : Nature Genetics. 50, 12, 1 p.

Research output: Contribution to journalComment/debate

Saccharum
Alleles
Genome
Molecular Sequence Annotation
Databases
4 Citations (Scopus)

Firefly genomes illuminate parallel origins of bioluminescence in beetles

Fallon, T. R., Lower, S. E., Chang, C. H., Bessho-Uehara, M., Martin, G. J., Bewick, A. J., Behringer, M., Debat, H. J., Wong, I., Day, J. C., Suvorov, A., Silva, C. J., Stanger-Hall, K. F., Hall, D. W., Schmitz, R. J., Nelson, D., Lewis, S. M., Shigenobu, S., Bybee, S. M., Larracuente, A. M. & 2 othersOba, Y. & Weng, J. K., Oct 1 2018, In : eLife. 7, e36495.

Research output: Contribution to journalArticle

Fireflies
Bioluminescence
Beetles
Genes
Genome

Fluorescence imaging of mycobacterial infection in live mice using fluorescent protein-expressing strains

Kong, Y. & Cirillo, J. D., Jan 1 2018, Methods in Molecular Biology. Humana Press Inc., p. 75-85 11 p. (Methods in Molecular Biology; vol. 1790).

Research output: Chapter in Book/Report/Conference proceedingChapter

Optical Imaging
Tuberculosis Vaccines
Lung
Bacterial Load
Mycobacterium bovis
1 Citation (Scopus)

Foot-and-mouth disease virus counteracts on internal ribosome entry site suppression by G3BP1 and inhibits G3BP1-mediated stress granule assembly via post-translational mechanisms

Ye, X., Pan, T., Wang, D., Fang, L., Ma, J., Zhu, X., Shi, Y., Zhang, K., Zheng, H., Chen, H., Li, K. & Xiao, S., May 25 2018, In : Frontiers in immunology. 9, MAY, 1142.

Research output: Contribution to journalArticle

Foot-and-Mouth Disease Virus
Viruses
Virus Diseases
Innate Immunity
Virus Replication

Habitat, species richness and hantaviruses of sigmodontine rodents within the Interior Atlantic Forest, Paraguay

Eastwood, G., Camp, J. V., Chu, Y. K., Sawyer, A. M., Owen, R. D., Cao, X., Taylor, M. K., Valdivieso-Torres, L., Sage, R. D., Yu, A., Goodin, D. G., Martinez Bruyn, V. J., McAllister, R. C., Rodriguez, L., William, E. P. & Jonsson, C., Aug 1 2018, In : PloS one. 13, 8, e0201307.

Research output: Contribution to journalArticle

Paraguay
Hantavirus
Ecosystem
Rodentia
rodents
1 Citation (Scopus)
Lactobacillus plantarum
Endotoxemia
Oxidative stress
Tight Junctions
Epidermal Growth Factor Receptor

Localized delivery of Cl-amidine from electrospun polydioxanone templates to regulate acute neutrophil NETosis: A preliminary evaluation of the PAD4 inhibitor for tissue engineering

Fetz, A. E., Neeli, I., Buddington, K. K., Read, R. W., Smeltzer, M. P., Radic, M. & Bowlin, G. L., Mar 28 2018, In : Frontiers in Pharmacology. 9, MAR, 289.

Research output: Contribution to journalArticle

Polydioxanone
Arginase
Tissue Engineering
Neutrophils
Guided Tissue Regeneration
3 Citations (Scopus)

More than one way in: Three Gln3 sequences required to relieve negative Ure2 regulation and support nuclear Gln3 import in saccharomyces cerevisiae

Tate, J. J., Rai, R. & Cooper, T., Jan 1 2018, In : Genetics. 208, 1, p. 207-227 21 p.

Research output: Contribution to journalArticle

Cell Nucleus Active Transport
Saccharomyces cerevisiae
Nitrogen
Sirolimus
Serine
1 Citation (Scopus)

Murine retinal citrullination declines with age and is mainly dependent on peptidyl arginine deiminase 4 (PAD4)

Hollingsworth, T. J., Radic, M., Beranova, S., Giorgianni, F., Wang, Y. & Iannaccone, A., Aug 1 2018, In : Investigative Ophthalmology and Visual Science. 59, 10, p. 3808-3815 8 p.

Research output: Contribution to journalArticle

Retina
arginine deiminase
Antibodies
Eye Enucleation
Retinaldehyde
1 Citation (Scopus)

Natural infection of Neotropical bats with hantavirus in Brazil

Sabino-Santos, G., Maia, F. G. M., Martins, R. B., Gagliardi, T. B., De Souza, W. M., Muylaert, R. L., Luna, L. K. D. S., Melo, D. M., De Souza Cardoso, R., Da Silva Barbosa, N., Pontelli, M. C., Mamani-Zapana, P. R., Vieira, T. M., Melo, N. M., Jonsson, C., Goodin, D., Salazar-Bravo, J., Dasilva, L. L. P., Arruda, E. & Figueiredo, L. T. M., Dec 1 2018, In : Scientific Reports. 8, 1, 9018.

Research output: Contribution to journalArticle

Hantavirus
Chiroptera
Brazil
infection
Desmodus

NETosis and ETosis: Incompletely understood types of granulocyte death and their proposed adaptive benefits and costs

Radic, M., Jan 1 2018, Apoptosis and Beyond: The Many Ways Cells Die. wiley, p. 511-534 24 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Granulocytes
Chromatin
Cost-Benefit Analysis
Pathogens
Cell death

New and noteworthy records of rodents (Mammalia, Rodentia, Cricetidae and Echimyidae) from Paraguay

Owen, R. D., Sánchez, H., Atkinson, K., McMahon, L. & Jonsson, C., Sep 7 2018, In : Check List. 14, 5, p. 721-730 10 p.

Research output: Contribution to journalArticle

Echimyidae
Paraguay
Mammalia
Rodentia
biome
1 Citation (Scopus)

Optimal feature selection using fuzzy combination of feature subset for transcriptome data

Singh, V., Vardhan, H., Verma, N. K. & Cui, Y., Oct 12 2018, 2018 IEEE International Conference on Fuzzy Systems, FUZZ 2018 - Proceedings. Institute of Electrical and Electronics Engineers Inc., 8491683. (IEEE International Conference on Fuzzy Systems; vol. 2018-July).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Set theory
Feature Selection
Feature extraction
Filter Method
Subset