Dissecting the genetic heterogeneity of myopia susceptibility in an Ashkenazi Jewish population using ordered subset analysis

Claire Simpson, Robert Wojciechowski, Grace Ibay, Dwight Stambolian, Joan E. Bailey-Wilson

Research output: Contribution to journalArticle

2 Citations (Scopus)

Abstract

Purpose: Despite many years of research, most of the genetic factors contributing to myopia development remain unknown. Genetic studies have pointed to a strong inherited component, but although many candidate regions have been implicated, few genes have been positively identified. Methods: We have previously reported 2 genomewide linkage scans in a population of 63 highly aggregated Ashkenazi Jewish families that identified a locus on chromosome 22. Here we used ordered subset analysis (OSA), conditioned on non-parametric linkage to chromosome 22 to detect other chromosomal regions which had evidence of linkage to myopia in subsets of the families, but not the overall sample. Results: Strong evidence of linkage to a 19-cM linkage interval with a peak OSA nonparametric allele-sharing logarithmof-odds (LOD) score of 3.14 on 20p12-q11.1 (ΔLOD=2.39, empirical p=0.029) was identified in a subset of 20 families that also exhibited strong evidence of linkage to chromosome 22. One other locus also presented with suggestive LOD scores >2.0 on chromosome 11p14-q14 and one locus on chromosome 6q22-q24 had an OSA LOD score=1.76 (ΔLOD=1.65, empirical p=0.02). Conclusions: The chromosome 6 and 20 loci are entirely novel and appear linked in a subset of families whose myopia is known to be linked to chromosome 22. The chromosome 11 locus overlaps with the known Myopia-7 (MYP7, OMIM 609256) locus. Using ordered subset analysis allows us to find additional loci linked to myopia in subsets of families, and underlines the complex genetic heterogeneity of myopia even in highly aggregated families and genetically isolated populations such as the Ashkenazi Jews.

Original languageEnglish (US)
Number of pages1
JournalMolecular Vision
Volume17
StatePublished - Jan 1 2011
Externally publishedYes

Fingerprint

Genetic Heterogeneity
Myopia
Chromosomes, Human, Pair 22
Population
Chromosomes
Chromosomes, Human, Pair 20
Genetic Databases
Jews
Genetic Research
Chromosomes, Human, Pair 11
Chromosomes, Human, Pair 6
Alleles
Genes

All Science Journal Classification (ASJC) codes

  • Ophthalmology

Cite this

Dissecting the genetic heterogeneity of myopia susceptibility in an Ashkenazi Jewish population using ordered subset analysis. / Simpson, Claire; Wojciechowski, Robert; Ibay, Grace; Stambolian, Dwight; Bailey-Wilson, Joan E.

In: Molecular Vision, Vol. 17, 01.01.2011.

Research output: Contribution to journalArticle

Simpson, Claire ; Wojciechowski, Robert ; Ibay, Grace ; Stambolian, Dwight ; Bailey-Wilson, Joan E. / Dissecting the genetic heterogeneity of myopia susceptibility in an Ashkenazi Jewish population using ordered subset analysis. In: Molecular Vision. 2011 ; Vol. 17.
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