Global exploratory analysis of massive neuroimaging collections using Microsoft Silverlight PivotViewer

Lei Yan, Xiaodong Zhou, Lu Lu, Arthur G. Centeno, Leonard Kuan, Michael Hawrylycz, Monica Larimer, Glenn D. Rosen, Robert Williams

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Citation (Scopus)

Abstract

Microsoft Silverlight PivotViewer is a web service architecture that provides fluid access to massive image databases using digital zoom image technology. The Pivot interface models some aspects of human vision, with the ability both to perform a global scan and to rapidly focus on the finest details. The inclusion of many levels of metadata in an XML file makes it possible for clients to rapidly re-sort and filter images on the web in ways that are powerful and highly informative. We have used Pivot to restructure a very large collection of histological images (2D) taken from the Mouse Brain Library (MBL, www.mbl.org). The new Pivot system (mbl.pivotcollections.org) can be subdivided, filtered, and sorted using a range of continuous and discrete metadata variables (sex, age, strain, genotype, behavior). The current implementation is optimized for visualization, but does not yet have analytic or annotation tiers that would enable facile quantitative dissection of image collections.

Original languageEnglish (US)
Title of host publicationProceedings of the 2011 Biomedical Sciences and Engineering Conference
Subtitle of host publicationImage Informatics and Analytics in Biomedicine, BSEC 2011
DOIs
StatePublished - Jul 7 2011
Event2011 Biomedical Sciences and Engineering Conference: Image Informatics and Analytics in Biomedicine, BSEC 2011 - Knoxville, TN, United States
Duration: Mar 15 2011Mar 17 2011

Publication series

NameProceedings of the 2011 Biomedical Sciences and Engineering Conference: Image Informatics and Analytics in Biomedicine, BSEC 2011

Other

Other2011 Biomedical Sciences and Engineering Conference: Image Informatics and Analytics in Biomedicine, BSEC 2011
CountryUnited States
CityKnoxville, TN
Period3/15/113/17/11

Fingerprint

Neuroimaging
Metadata
Dissection
XML
Web services
Brain
Visualization
Fluids

All Science Journal Classification (ASJC) codes

  • Computer Graphics and Computer-Aided Design
  • Biomedical Engineering

Cite this

Yan, L., Zhou, X., Lu, L., Centeno, A. G., Kuan, L., Hawrylycz, M., ... Williams, R. (2011). Global exploratory analysis of massive neuroimaging collections using Microsoft Silverlight PivotViewer. In Proceedings of the 2011 Biomedical Sciences and Engineering Conference: Image Informatics and Analytics in Biomedicine, BSEC 2011 [5872323] (Proceedings of the 2011 Biomedical Sciences and Engineering Conference: Image Informatics and Analytics in Biomedicine, BSEC 2011). https://doi.org/10.1109/BSEC.2011.5872323

Global exploratory analysis of massive neuroimaging collections using Microsoft Silverlight PivotViewer. / Yan, Lei; Zhou, Xiaodong; Lu, Lu; Centeno, Arthur G.; Kuan, Leonard; Hawrylycz, Michael; Larimer, Monica; Rosen, Glenn D.; Williams, Robert.

Proceedings of the 2011 Biomedical Sciences and Engineering Conference: Image Informatics and Analytics in Biomedicine, BSEC 2011. 2011. 5872323 (Proceedings of the 2011 Biomedical Sciences and Engineering Conference: Image Informatics and Analytics in Biomedicine, BSEC 2011).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Yan, L, Zhou, X, Lu, L, Centeno, AG, Kuan, L, Hawrylycz, M, Larimer, M, Rosen, GD & Williams, R 2011, Global exploratory analysis of massive neuroimaging collections using Microsoft Silverlight PivotViewer. in Proceedings of the 2011 Biomedical Sciences and Engineering Conference: Image Informatics and Analytics in Biomedicine, BSEC 2011., 5872323, Proceedings of the 2011 Biomedical Sciences and Engineering Conference: Image Informatics and Analytics in Biomedicine, BSEC 2011, 2011 Biomedical Sciences and Engineering Conference: Image Informatics and Analytics in Biomedicine, BSEC 2011, Knoxville, TN, United States, 3/15/11. https://doi.org/10.1109/BSEC.2011.5872323
Yan L, Zhou X, Lu L, Centeno AG, Kuan L, Hawrylycz M et al. Global exploratory analysis of massive neuroimaging collections using Microsoft Silverlight PivotViewer. In Proceedings of the 2011 Biomedical Sciences and Engineering Conference: Image Informatics and Analytics in Biomedicine, BSEC 2011. 2011. 5872323. (Proceedings of the 2011 Biomedical Sciences and Engineering Conference: Image Informatics and Analytics in Biomedicine, BSEC 2011). https://doi.org/10.1109/BSEC.2011.5872323
Yan, Lei ; Zhou, Xiaodong ; Lu, Lu ; Centeno, Arthur G. ; Kuan, Leonard ; Hawrylycz, Michael ; Larimer, Monica ; Rosen, Glenn D. ; Williams, Robert. / Global exploratory analysis of massive neuroimaging collections using Microsoft Silverlight PivotViewer. Proceedings of the 2011 Biomedical Sciences and Engineering Conference: Image Informatics and Analytics in Biomedicine, BSEC 2011. 2011. (Proceedings of the 2011 Biomedical Sciences and Engineering Conference: Image Informatics and Analytics in Biomedicine, BSEC 2011).
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