R/qtl: QTL mapping in experimental crosses

Karl W. Broman, Hao Wu, Saunak Sen, Gary A. Churchill

Research output: Contribution to journalArticle

1551 Citations (Scopus)

Abstract

Summary: R/qtl is an extensible, interactive environment for mapping quantitative trait loci (QTLs) in experimental populations derived from inbred lines. It is implemented as an add-on package for the freely-available statistical software, R, and includes functions for estimating genetic maps, identifying genotyping errors, and performing single-QTL and two-dimensional, two-QTL genome scans by multiple methods, with the possible inclusion of covariates.

Original languageEnglish (US)
Pages (from-to)889-890
Number of pages2
JournalBioinformatics
Volume19
Issue number7
DOIs
StatePublished - May 1 2003

Fingerprint

Quantitative Trait Loci
Genes
Statistical Software
Covariates
Genome
Software
Inclusion
Line
Population

All Science Journal Classification (ASJC) codes

  • Statistics and Probability
  • Biochemistry
  • Molecular Biology
  • Computer Science Applications
  • Computational Theory and Mathematics
  • Computational Mathematics

Cite this

R/qtl : QTL mapping in experimental crosses. / Broman, Karl W.; Wu, Hao; Sen, Saunak; Churchill, Gary A.

In: Bioinformatics, Vol. 19, No. 7, 01.05.2003, p. 889-890.

Research output: Contribution to journalArticle

Broman, KW, Wu, H, Sen, S & Churchill, GA 2003, 'R/qtl: QTL mapping in experimental crosses', Bioinformatics, vol. 19, no. 7, pp. 889-890. https://doi.org/10.1093/bioinformatics/btg112
Broman, Karl W. ; Wu, Hao ; Sen, Saunak ; Churchill, Gary A. / R/qtl : QTL mapping in experimental crosses. In: Bioinformatics. 2003 ; Vol. 19, No. 7. pp. 889-890.
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