The Physcomitrella genome reveals evolutionary insights into the conquest of land by plants

Stefan A. Rensing, Daniel Lang, Andreas D. Zimmer, Astrid Terry, Asaf Salamov, Harris Shapiro, Tomoaki Nishiyama, Pierre François Perroud, Erika A. Lindquist, Yasuko Kamisugi, Takako Tanahashi, Keiko Sakakibara, Tomomichi Fujita, Kazuko Oishi, Tadasu Shin-I, Yoko Kuroki, Atsushi Toyoda, Yutaka Suzuki, Shin Ichi Hashimoto, Kazuo Yamaguchi & 50 others Sumio Sugano, Yuji Kohara, Asao Fujiyama, Aldwin Anterola, Setsuyuki Aoki, Neil Ashton, W. Brad Barbazuk, Elizabeth Barker, Jeffrey L. Bennetzen, Robert Blankenship, Hyun Cho Sung, Susan K. Dutcher, Mark Estelle, Jeffrey A. Fawcett, Heidrun Gundlach, Kousuke Hanada, Alexander Heyl, Karen A. Hicks, Jon Hughes, Martin Lohr, Klaus Mayer, Alexander Melkozernov, Takashi Murata, David Nelson, Birgit Pils, Michael Prigge, Bernd Reiss, Tanya Renner, Stephane Rombauts, Paul J. Rushton, Anton Sanderfoot, Gabriele Schween, Shin Han Shiu, Kurt Stueber, Frederica L. Theodoulou, Hank Tu, Yves Van De Peer, Paul J. Verrier, Elizabeth Waters, Andrew Wood, Lixing Yang, David Cove, Andrew C. Cuming, Mitsuyasu Hasebe, Susan Lucas, Brent D. Mishler, Ralf Reski, Igor V. Grigoriev, Ralph S. Quatrano, Jeffrey L. Boore

Research output: Contribution to journalArticle

1091 Citations (Scopus)

Abstract

We report the draft genome sequence of the model moss Physcomitrella patens and compare its features with those of flowering plants, from which it is separated by more than 400 million years, and unicellular aquatic algae. This comparison reveals genomic changes concomitant with the evolutionary movement to land, including a general increase in gene family complexity; loss of genes associated with aquatic environments (e.g., flagellar arms); acquisition of genes for tolerating terrestrial stresses (e.g., variation in temperature and water availability); and the development of the auxin and abscisic acid signaling pathways for coordinating multicellular growth and dehydration response. The Physcomitrella genome provides a resource for phylogenetic inferences about gene function and for experimental analysis of plant processes through this plant's unique facility for reverse genetics.

Original languageEnglish (US)
Pages (from-to)64-69
Number of pages6
JournalScience
Volume319
Issue number5859
DOIs
StatePublished - Jan 4 2008

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Bryopsida
Embryophyta
Genome
Genes
Bryophyta
Reverse Genetics
Abscisic Acid
Indoleacetic Acids
Dehydration
Temperature
Water
Growth

All Science Journal Classification (ASJC) codes

  • General

Cite this

Rensing, S. A., Lang, D., Zimmer, A. D., Terry, A., Salamov, A., Shapiro, H., ... Boore, J. L. (2008). The Physcomitrella genome reveals evolutionary insights into the conquest of land by plants. Science, 319(5859), 64-69. https://doi.org/10.1126/science.1150646

The Physcomitrella genome reveals evolutionary insights into the conquest of land by plants. / Rensing, Stefan A.; Lang, Daniel; Zimmer, Andreas D.; Terry, Astrid; Salamov, Asaf; Shapiro, Harris; Nishiyama, Tomoaki; Perroud, Pierre François; Lindquist, Erika A.; Kamisugi, Yasuko; Tanahashi, Takako; Sakakibara, Keiko; Fujita, Tomomichi; Oishi, Kazuko; Shin-I, Tadasu; Kuroki, Yoko; Toyoda, Atsushi; Suzuki, Yutaka; Hashimoto, Shin Ichi; Yamaguchi, Kazuo; Sugano, Sumio; Kohara, Yuji; Fujiyama, Asao; Anterola, Aldwin; Aoki, Setsuyuki; Ashton, Neil; Barbazuk, W. Brad; Barker, Elizabeth; Bennetzen, Jeffrey L.; Blankenship, Robert; Sung, Hyun Cho; Dutcher, Susan K.; Estelle, Mark; Fawcett, Jeffrey A.; Gundlach, Heidrun; Hanada, Kousuke; Heyl, Alexander; Hicks, Karen A.; Hughes, Jon; Lohr, Martin; Mayer, Klaus; Melkozernov, Alexander; Murata, Takashi; Nelson, David; Pils, Birgit; Prigge, Michael; Reiss, Bernd; Renner, Tanya; Rombauts, Stephane; Rushton, Paul J.; Sanderfoot, Anton; Schween, Gabriele; Shiu, Shin Han; Stueber, Kurt; Theodoulou, Frederica L.; Tu, Hank; Van De Peer, Yves; Verrier, Paul J.; Waters, Elizabeth; Wood, Andrew; Yang, Lixing; Cove, David; Cuming, Andrew C.; Hasebe, Mitsuyasu; Lucas, Susan; Mishler, Brent D.; Reski, Ralf; Grigoriev, Igor V.; Quatrano, Ralph S.; Boore, Jeffrey L.

In: Science, Vol. 319, No. 5859, 04.01.2008, p. 64-69.

Research output: Contribution to journalArticle

Rensing, SA, Lang, D, Zimmer, AD, Terry, A, Salamov, A, Shapiro, H, Nishiyama, T, Perroud, PF, Lindquist, EA, Kamisugi, Y, Tanahashi, T, Sakakibara, K, Fujita, T, Oishi, K, Shin-I, T, Kuroki, Y, Toyoda, A, Suzuki, Y, Hashimoto, SI, Yamaguchi, K, Sugano, S, Kohara, Y, Fujiyama, A, Anterola, A, Aoki, S, Ashton, N, Barbazuk, WB, Barker, E, Bennetzen, JL, Blankenship, R, Sung, HC, Dutcher, SK, Estelle, M, Fawcett, JA, Gundlach, H, Hanada, K, Heyl, A, Hicks, KA, Hughes, J, Lohr, M, Mayer, K, Melkozernov, A, Murata, T, Nelson, D, Pils, B, Prigge, M, Reiss, B, Renner, T, Rombauts, S, Rushton, PJ, Sanderfoot, A, Schween, G, Shiu, SH, Stueber, K, Theodoulou, FL, Tu, H, Van De Peer, Y, Verrier, PJ, Waters, E, Wood, A, Yang, L, Cove, D, Cuming, AC, Hasebe, M, Lucas, S, Mishler, BD, Reski, R, Grigoriev, IV, Quatrano, RS & Boore, JL 2008, 'The Physcomitrella genome reveals evolutionary insights into the conquest of land by plants', Science, vol. 319, no. 5859, pp. 64-69. https://doi.org/10.1126/science.1150646
Rensing SA, Lang D, Zimmer AD, Terry A, Salamov A, Shapiro H et al. The Physcomitrella genome reveals evolutionary insights into the conquest of land by plants. Science. 2008 Jan 4;319(5859):64-69. https://doi.org/10.1126/science.1150646
Rensing, Stefan A. ; Lang, Daniel ; Zimmer, Andreas D. ; Terry, Astrid ; Salamov, Asaf ; Shapiro, Harris ; Nishiyama, Tomoaki ; Perroud, Pierre François ; Lindquist, Erika A. ; Kamisugi, Yasuko ; Tanahashi, Takako ; Sakakibara, Keiko ; Fujita, Tomomichi ; Oishi, Kazuko ; Shin-I, Tadasu ; Kuroki, Yoko ; Toyoda, Atsushi ; Suzuki, Yutaka ; Hashimoto, Shin Ichi ; Yamaguchi, Kazuo ; Sugano, Sumio ; Kohara, Yuji ; Fujiyama, Asao ; Anterola, Aldwin ; Aoki, Setsuyuki ; Ashton, Neil ; Barbazuk, W. Brad ; Barker, Elizabeth ; Bennetzen, Jeffrey L. ; Blankenship, Robert ; Sung, Hyun Cho ; Dutcher, Susan K. ; Estelle, Mark ; Fawcett, Jeffrey A. ; Gundlach, Heidrun ; Hanada, Kousuke ; Heyl, Alexander ; Hicks, Karen A. ; Hughes, Jon ; Lohr, Martin ; Mayer, Klaus ; Melkozernov, Alexander ; Murata, Takashi ; Nelson, David ; Pils, Birgit ; Prigge, Michael ; Reiss, Bernd ; Renner, Tanya ; Rombauts, Stephane ; Rushton, Paul J. ; Sanderfoot, Anton ; Schween, Gabriele ; Shiu, Shin Han ; Stueber, Kurt ; Theodoulou, Frederica L. ; Tu, Hank ; Van De Peer, Yves ; Verrier, Paul J. ; Waters, Elizabeth ; Wood, Andrew ; Yang, Lixing ; Cove, David ; Cuming, Andrew C. ; Hasebe, Mitsuyasu ; Lucas, Susan ; Mishler, Brent D. ; Reski, Ralf ; Grigoriev, Igor V. ; Quatrano, Ralph S. ; Boore, Jeffrey L. / The Physcomitrella genome reveals evolutionary insights into the conquest of land by plants. In: Science. 2008 ; Vol. 319, No. 5859. pp. 64-69.
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abstract = "We report the draft genome sequence of the model moss Physcomitrella patens and compare its features with those of flowering plants, from which it is separated by more than 400 million years, and unicellular aquatic algae. This comparison reveals genomic changes concomitant with the evolutionary movement to land, including a general increase in gene family complexity; loss of genes associated with aquatic environments (e.g., flagellar arms); acquisition of genes for tolerating terrestrial stresses (e.g., variation in temperature and water availability); and the development of the auxin and abscisic acid signaling pathways for coordinating multicellular growth and dehydration response. The Physcomitrella genome provides a resource for phylogenetic inferences about gene function and for experimental analysis of plant processes through this plant's unique facility for reverse genetics.",
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AU - Salamov, Asaf

AU - Shapiro, Harris

AU - Nishiyama, Tomoaki

AU - Perroud, Pierre François

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AU - Barbazuk, W. Brad

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