The UDP Glucuronosyltransferase Gene Super family

Suggested Nomenclature Based on Evolutionary Divergence

Brian Burchell, Daniel W. Nebert, David Nelson, Karl W. Bock, Takashi Iyanagi, Peter L.m. Jansen, Doron Lancet, Gerard J. Mulder, Jayanta Roy Chowdhury, Gerard Siest, Thomas R. Tephly, Peter I. Mackenzie

Research output: Contribution to journalArticle

262 Citations (Scopus)

Abstract

A nomenclature system for the UDP glucuronosyltransferase superfamily is proposed, based on divergent evolution of the genes. A total of 26 distinct cDNAs in five mammalian species have been sequenced to date. Comparison of the deduced amino acid sequences leads to the definition of two families and a total of three subfamilies. For naming each gene, we propose that the root symbol UGT for human (Ugt for mouse), representing “UDP glucuronosyltransferase, be followed by an Arabic number denoting the family, a letter designating the subfamily, and an Arabic numeral representing the individual gene within the family or sub-family (hyphen before the Arabic number for mouse), e.g., human UGT2B1 and murine Ugt2b-1. Whereas the gene and cDNA should be italicized, the corresponding transcript, protein, and enzyme activity should not be written with lowercase letters or in italics, e.g., human or murine UGT2B1. Recent experimental evidence suggests that several exons of the UGT1 gene might be shared, indicating that distinct UGT1 transcripts and proteins may arise via alternative splicing; the gene and gene product of alternative splicing will be designated with an asterisk, e.g., UGT1*6 and UGT1*6, respectively. When an orthologous gene between species cannot be identified with certainty, as occurs in the UGT2B subfamily, we recommend sequential naming of the genes chronologically as they become characterized. We suggest that the human nomenclature system be used for species other than the mouse. We anticipate that this UGT gene nomenclature system will require updating on a regular basis.

Original languageEnglish (US)
Pages (from-to)487-494
Number of pages8
JournalDNA and Cell Biology
Volume10
Issue number7
DOIs
StatePublished - Jan 1 1991

Fingerprint

Glucuronosyltransferase
Terminology
Genes
Alternative Splicing
Complementary DNA
Amino Acid Sequence
Exons
Proteins

All Science Journal Classification (ASJC) codes

  • Molecular Biology
  • Genetics
  • Cell Biology

Cite this

Burchell, B., Nebert, D. W., Nelson, D., Bock, K. W., Iyanagi, T., Jansen, P. L. M., ... Mackenzie, P. I. (1991). The UDP Glucuronosyltransferase Gene Super family: Suggested Nomenclature Based on Evolutionary Divergence. DNA and Cell Biology, 10(7), 487-494. https://doi.org/10.1089/dna.1991.10.487

The UDP Glucuronosyltransferase Gene Super family : Suggested Nomenclature Based on Evolutionary Divergence. / Burchell, Brian; Nebert, Daniel W.; Nelson, David; Bock, Karl W.; Iyanagi, Takashi; Jansen, Peter L.m.; Lancet, Doron; Mulder, Gerard J.; Chowdhury, Jayanta Roy; Siest, Gerard; Tephly, Thomas R.; Mackenzie, Peter I.

In: DNA and Cell Biology, Vol. 10, No. 7, 01.01.1991, p. 487-494.

Research output: Contribution to journalArticle

Burchell, B, Nebert, DW, Nelson, D, Bock, KW, Iyanagi, T, Jansen, PLM, Lancet, D, Mulder, GJ, Chowdhury, JR, Siest, G, Tephly, TR & Mackenzie, PI 1991, 'The UDP Glucuronosyltransferase Gene Super family: Suggested Nomenclature Based on Evolutionary Divergence', DNA and Cell Biology, vol. 10, no. 7, pp. 487-494. https://doi.org/10.1089/dna.1991.10.487
Burchell, Brian ; Nebert, Daniel W. ; Nelson, David ; Bock, Karl W. ; Iyanagi, Takashi ; Jansen, Peter L.m. ; Lancet, Doron ; Mulder, Gerard J. ; Chowdhury, Jayanta Roy ; Siest, Gerard ; Tephly, Thomas R. ; Mackenzie, Peter I. / The UDP Glucuronosyltransferase Gene Super family : Suggested Nomenclature Based on Evolutionary Divergence. In: DNA and Cell Biology. 1991 ; Vol. 10, No. 7. pp. 487-494.
@article{c224a3df1c26469393707a802e4d6b2c,
title = "The UDP Glucuronosyltransferase Gene Super family: Suggested Nomenclature Based on Evolutionary Divergence",
abstract = "A nomenclature system for the UDP glucuronosyltransferase superfamily is proposed, based on divergent evolution of the genes. A total of 26 distinct cDNAs in five mammalian species have been sequenced to date. Comparison of the deduced amino acid sequences leads to the definition of two families and a total of three subfamilies. For naming each gene, we propose that the root symbol UGT for human (Ugt for mouse), representing “UDP glucuronosyltransferase, be followed by an Arabic number denoting the family, a letter designating the subfamily, and an Arabic numeral representing the individual gene within the family or sub-family (hyphen before the Arabic number for mouse), e.g., human UGT2B1 and murine Ugt2b-1. Whereas the gene and cDNA should be italicized, the corresponding transcript, protein, and enzyme activity should not be written with lowercase letters or in italics, e.g., human or murine UGT2B1. Recent experimental evidence suggests that several exons of the UGT1 gene might be shared, indicating that distinct UGT1 transcripts and proteins may arise via alternative splicing; the gene and gene product of alternative splicing will be designated with an asterisk, e.g., UGT1*6 and UGT1*6, respectively. When an orthologous gene between species cannot be identified with certainty, as occurs in the UGT2B subfamily, we recommend sequential naming of the genes chronologically as they become characterized. We suggest that the human nomenclature system be used for species other than the mouse. We anticipate that this UGT gene nomenclature system will require updating on a regular basis.",
author = "Brian Burchell and Nebert, {Daniel W.} and David Nelson and Bock, {Karl W.} and Takashi Iyanagi and Jansen, {Peter L.m.} and Doron Lancet and Mulder, {Gerard J.} and Chowdhury, {Jayanta Roy} and Gerard Siest and Tephly, {Thomas R.} and Mackenzie, {Peter I.}",
year = "1991",
month = "1",
day = "1",
doi = "10.1089/dna.1991.10.487",
language = "English (US)",
volume = "10",
pages = "487--494",
journal = "DNA and Cell Biology",
issn = "1044-5498",
publisher = "Mary Ann Liebert Inc.",
number = "7",

}

TY - JOUR

T1 - The UDP Glucuronosyltransferase Gene Super family

T2 - Suggested Nomenclature Based on Evolutionary Divergence

AU - Burchell, Brian

AU - Nebert, Daniel W.

AU - Nelson, David

AU - Bock, Karl W.

AU - Iyanagi, Takashi

AU - Jansen, Peter L.m.

AU - Lancet, Doron

AU - Mulder, Gerard J.

AU - Chowdhury, Jayanta Roy

AU - Siest, Gerard

AU - Tephly, Thomas R.

AU - Mackenzie, Peter I.

PY - 1991/1/1

Y1 - 1991/1/1

N2 - A nomenclature system for the UDP glucuronosyltransferase superfamily is proposed, based on divergent evolution of the genes. A total of 26 distinct cDNAs in five mammalian species have been sequenced to date. Comparison of the deduced amino acid sequences leads to the definition of two families and a total of three subfamilies. For naming each gene, we propose that the root symbol UGT for human (Ugt for mouse), representing “UDP glucuronosyltransferase, be followed by an Arabic number denoting the family, a letter designating the subfamily, and an Arabic numeral representing the individual gene within the family or sub-family (hyphen before the Arabic number for mouse), e.g., human UGT2B1 and murine Ugt2b-1. Whereas the gene and cDNA should be italicized, the corresponding transcript, protein, and enzyme activity should not be written with lowercase letters or in italics, e.g., human or murine UGT2B1. Recent experimental evidence suggests that several exons of the UGT1 gene might be shared, indicating that distinct UGT1 transcripts and proteins may arise via alternative splicing; the gene and gene product of alternative splicing will be designated with an asterisk, e.g., UGT1*6 and UGT1*6, respectively. When an orthologous gene between species cannot be identified with certainty, as occurs in the UGT2B subfamily, we recommend sequential naming of the genes chronologically as they become characterized. We suggest that the human nomenclature system be used for species other than the mouse. We anticipate that this UGT gene nomenclature system will require updating on a regular basis.

AB - A nomenclature system for the UDP glucuronosyltransferase superfamily is proposed, based on divergent evolution of the genes. A total of 26 distinct cDNAs in five mammalian species have been sequenced to date. Comparison of the deduced amino acid sequences leads to the definition of two families and a total of three subfamilies. For naming each gene, we propose that the root symbol UGT for human (Ugt for mouse), representing “UDP glucuronosyltransferase, be followed by an Arabic number denoting the family, a letter designating the subfamily, and an Arabic numeral representing the individual gene within the family or sub-family (hyphen before the Arabic number for mouse), e.g., human UGT2B1 and murine Ugt2b-1. Whereas the gene and cDNA should be italicized, the corresponding transcript, protein, and enzyme activity should not be written with lowercase letters or in italics, e.g., human or murine UGT2B1. Recent experimental evidence suggests that several exons of the UGT1 gene might be shared, indicating that distinct UGT1 transcripts and proteins may arise via alternative splicing; the gene and gene product of alternative splicing will be designated with an asterisk, e.g., UGT1*6 and UGT1*6, respectively. When an orthologous gene between species cannot be identified with certainty, as occurs in the UGT2B subfamily, we recommend sequential naming of the genes chronologically as they become characterized. We suggest that the human nomenclature system be used for species other than the mouse. We anticipate that this UGT gene nomenclature system will require updating on a regular basis.

UR - http://www.scopus.com/inward/record.url?scp=0025773294&partnerID=8YFLogxK

UR - http://www.scopus.com/inward/citedby.url?scp=0025773294&partnerID=8YFLogxK

U2 - 10.1089/dna.1991.10.487

DO - 10.1089/dna.1991.10.487

M3 - Article

VL - 10

SP - 487

EP - 494

JO - DNA and Cell Biology

JF - DNA and Cell Biology

SN - 1044-5498

IS - 7

ER -